Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015801220.1_cds_XP_016473522.1_6538
CDS Infomation

[gene=LOC107795379] [db_xref=GeneID:107795379] [protein=F-box/LRR-repeat protein 10-like] [protein_id=XP_016473522.1] [location=complement(join(35976..37412,39226..39319,39473..39678,39756..39941))] [gbkey=CDS]
Sequence

ATGGCAAGGTCGTCAGACCCTGGCACACAGCGGCAGATGAGCCTGGACCTTCTTCCCTCA
GCACTAGTTGCCACTGTGATGACAAAACTGGACATAGGTTCTATCCGTTCTCTGGCATGC
ACTTGCAAGGCCTTTCATTCATGTGCTTCGCACATGCTTCGCTTCATTCCCAGTTTCCAT
CTCCTTGATATTGCTCCGTCTGCTGAATTGTTAAGGCCGTTGCTACCTCCCAATCCTTAC
CTTCATAGCTTGAAGGTAGATTGCACGCGACTTGATGATTCATCCCTTGATTATCTTCTG
CAGCCGACTTTACAAGAGCTTTGCCTCCATAAGTGCGCTGATTTCAGCGGAAGGCTTCTG
TCTCAGGTCGGGCAGCACTGTAAAGACCTCAGGTTTCTTTATCTGAGTTCTTTGGCGGAG
AAGAGAGGCAGATCAATTGATGTATCTGATCTAGAGGTCTTATTTGGCGGATGCACTCAG
CTGGAAACTCTGATCCTGATGTTTGATGTCTCAATGTTTTTGCGGCATAATTTTGCTCGT
GTGTGGGCTATCGCCCCTGCAACACTGTTATCCCTTGAAGTGGGTTATATTTCTTCAGTA
ATGGTGACAGAATTACTTAGCCCGCCTGTGATACCTTATCAGTCAATGGAGCATATTCAG
CCATCCATATTACCAGGAATACAGAAGTTATGTCTTTCAGTGGATTATATTACTGACACC
ATGGTCAGCACAATAACTACAAATCTCAACTGTTTGACACATTTGGACCTTCGAGACTCA
CCAATTATGAAACCAAGATTGGCGTTTGATCTTACCAATGCAGGTATTCAACAAATTAAT
CTGCACGGGAGATTGAAACATCTGTCATTGGTGAGGAGTCAAGAGATTTTTCCAGCTTAC
TTCAAGCGAGTTAATGATCTCGGTATTCTTCTTATGGCTGATAGATGCTCAGACATGGAA
AGTATTTGTCTTGGTGGTTTTTGTCAGGTTACAGACACAGGTTTTCGAACAATTTTGCAT
TCATGTGCTAAAATATATAAGCTGAGGATCTATCACGGGCCCCACTTGACTGATCTTGTA
TTTCACGACATTGCTGCAACTTCGCTTACTTTGACACATGTTAGTTTAAGATGGTGTAAT
CTTTTGACGAACCATGGTGTTGCACGATTGGTTTCCAATGAAAATCTTAGTGTGCTTGAC
TTGAGGGACTGTAGGAATATTGGGGATGAAGCCCTCCGAACCATTAGCAATCTTTCTAAA
TTGAAGGCTTTACTGATTGATGGTTCTGATATAAGTGATATGGGATTGTCCCATTTATCA
AAAGGGGCAATAAGTTCGCTTGTATCATTGTCTGTACGAGGGTGCAAGAGACTAACCGAC
AATTGCATTTCCTTTATCTTTGATGAATCTTCTAATTGTGAATTGAGAGAATTGGACTTG
TCAAACATTCCGAACCTATCTGATGCTGGTGTACTTTTGCTCGCAAAGAGACGTATTCCA
CTATTTGAGCTTAGAATGCGTCAATGTCCGCTGATAAGTGATACTTCAATTATGGTTTTA
GCATCAATGAAGGTTGATGAAGAAGGGTGGTATGGAAGTAGTCTACGGCTGTTGGATCTC
TATAATTGTGGGGGTATCACTCATCTTTCATTCCAATGGTTAAAGAAGCCTTACTTCCCC
AGATTGAGATGGTTGGGAGTATCGAGTTATGTCAGCAGGGATGTGCTGGATGCTTTATCC
CGCAATAGACCATTTCTGCATGTAGGTTTTCATGGGGAGGAGCTGGGGACGACTGACCAA
TGGGATAATACAGACAATCTTTATATGCATGACTATGATGAAGTTGATGAGTTGGAACAA
TGGCTTGATGGAGAAAATGAGGGTGATGATGAGGCCATTCAAGAAGCAGAAAACATCGCA
TAA

Peptide Sequence

PEP ID

XP_016473522.1
PEP Infomation

PREDICTED: F-box/LRR-repeat protein 10-like [Nicotiana tabacum]
Sequence

MARSSDPGTQRQMSLDLLPSALVATVMTKLDIGSIRSLACTCKAFHSCASHMLRFIPSFH
LLDIAPSAELLRPLLPPNPYLHSLKVDCTRLDDSSLDYLLQPTLQELCLHKCADFSGRLL
SQVGQHCKDLRFLYLSSLAEKRGRSIDVSDLEVLFGGCTQLETLILMFDVSMFLRHNFAR
VWAIAPATLLSLEVGYISSVMVTELLSPPVIPYQSMEHIQPSILPGIQKLCLSVDYITDT
MVSTITTNLNCLTHLDLRDSPIMKPRLAFDLTNAGIQQINLHGRLKHLSLVRSQEIFPAY
FKRVNDLGILLMADRCSDMESICLGGFCQVTDTGFRTILHSCAKIYKLRIYHGPHLTDLV
FHDIAATSLTLTHVSLRWCNLLTNHGVARLVSNENLSVLDLRDCRNIGDEALRTISNLSK
LKALLIDGSDISDMGLSHLSKGAISSLVSLSVRGCKRLTDNCISFIFDESSNCELRELDL
SNIPNLSDAGVLLLAKRRIPLFELRMRQCPLISDTSIMVLASMKVDEEGWYGSSLRLLDL
YNCGGITHLSFQWLKKPYFPRLRWLGVSSYVSRDVLDALSRNRPFLHVGFHGEELGTTDQ
WDNTDNLYMHDYDEVDELEQWLDGENEGDDEAIQEAENIA

Transcript Sequence

Gene sequence data has not been registered.